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Table 8. Terms, symbols, and units. SI base units are used, except for the liter [L = dm3]. SI refers to ref. [11].
Term | Link to MitoPedia term | Symbol | Unit | Links and comments |
---|---|---|---|---|
alternative quinol oxidase] | alternative oxidase | AOX | - | Fig. 1B |
adenosine monophosphate | AMP | AMP | - | 2 ADP β ATP+AMP |
adenosine diphosphate | ADP | ADP | - | Tab. 1; Fig. 1, 2, 5 |
adenosine triphosphate | ATP | ATP | - | Fig. 2, 5 |
adenylates | adenylates | AMP, ADP, ATP | - | Section 2.5.1 |
amount of substance X | amount | nX or n(X) | [mol] | SI |
ATP yield per O2 | ATP yield | YPΒ»/O2 | - | PΒ»/O2 ratio measured in any respiratory state |
catabolic reaction | catabolic reaction | k | - | Fig. 1, 3 |
catabolic rate of respiration | respiration | JkO2; IkO2 | varies | Fig. 1, 3; see flux J and flow I |
cell count | cell count, count | Nce | [x] | Tab. 4; Fig. 5; see number of cells |
cell mass | cell mass | mce | [kg] | Tab. 5; Fig. 5 |
cell mass, mass per cell | cell mass | MNce | [kgβxΒ-1] | Tab. 5; Fig. 5 |
cell-mass concentration | mass concentration | Cmce | [kgβLΒ-1] | see Cms: Tab. 4; Cmce = mceβV-1 |
cell-count concentration | count concentration | Cce | [xβLΒ-1] | Tab. 4; Cce = NceβV-1 |
cell viability index | cell viability | VI | - | VI = NvceβNceΒ-1 = 1 - NdceβNceΒ-1 |
charge number of entity B | charge number | zB | - | Tab. 6; zO2 = 4 [[[Cohen 2008 IUPAC Green Book |24]]] |
Complexes I to IV | Complex I | CI to CIV | - | respiratory ET Complexes are redox proton pumps; Fig. 1B; F1FO-ATPase is not a redox proton pump of the ETS, hence the term CV is not recommended |
concentration of X, count | concentration | CX = NXβVΒ-1 | [xβL-1] | Tab. 4 (number concentration [[[Cohen 2008 IUPAC Green Book |24]]]) |
concentration of B, amount | concentration | cB = NBβVΒ-1 | [molβLΒ-1] | SI: amount of substance concentration [[[Cohen 2008 IUPAC Green Book |24]]] |
concentration of O2, amount | concentration | cO2 = nO2βVΒ-1 | [molβLΒ-1] | Box 2; [O2] |
count of X | count | NX | [x] | SI; see number of entities X |
coupling control state | coupling control state | CCS | - | Section 2.4.1 |
dead cells | cell viability | dce | - | Tab. 5 |
electrical format | format | e | [C] | Tab. 6 |
electron transfer, state | electron transfer state | ET | - | Tab. 1; Fig. 2B, 4 (State 3u) |
electron transfer system | electron transfer system | ETS | - | Fig. 2B, 4 (electron transport chain) |
entity | entity | X | [x] | single countable object; Tab. 4 |
ET-capacity | [[]] | Example | Example | Example |
ET-excess capacity | [[]] | Example | Example | Example |
flow, for O2 | [[]] | Example | Example | Example |
flux, for O2 | [[]] | Example | Example | Example |
inorganic phosphate | [[]] | Example | Example | Example |
inorganic phosphate carrier | [[]] | Example | Example | Example |
isolated mitochondria | [[]] | Example | Example | Example |
living cells | [[]] | Example | Example | Example |
LEAK-state | [[]] | Example | Example | Example |
LEAK-respiration | [[]] | Example | Example | Example |
mass concentration of sample s | [[]] | Example | Example | Example |
mass format | [[]] | Example | Example | Example |
mass of diluted sample | [[]] | Example | Example | Example |
mass per single object | [[]] | Example | Example | Example |
mass, dry mass | [[]] | Example | Example | Example |
mass, wet mass | [[]] | Example | Example | Example |
MITOCARTA | [[]] | Example | Example | Example |
MitoPedia | [[]] | Example | Example | Example |
mitochondria or mitochondrial | [[]] | Example | Example | Example |
mitochondrial DNA | [[]] | Example | Example | Example |
mitochondrial concentration | [[]] | Example | Example | Example |
mitochondrial content | [[]] | Example | Example | Example |
mitochondrial density | [[]] | Example | Example | Example |
mitochondrial elementary marker | [[]] | Example | Example | Example |
mitochondrial elementary unit | [[]] | Example | Example | Example |
mitochondrial inner membrane | [[]] | Example | Example | Example |
mitochondrial outer membrane | [[]] | Example | Example | Example |
mitochondrial recovery | [[]] | Example | Example | Example |
mitochondrial yield | [[]] | Example | Example | Example |
molar format | [[]] | Example | Example | Example |
molar mass | [[]] | Example | Example | Example |
negative | [[]] | Example | Example | Example |
count format | [[]] | Example | Example | Example |
number of cells | [[]] | Example | Example | Example |
number of dead cells | [[]] | Example | Example | Example |
number of entities B | [[]] | Example | Example | Example |
number of entities X; count | [[]] | Example | Example | Example |
number of viable cells | [[]] | Example | Example | Example |
organisms | [[]] | Example | Example | Example |
oxidative phosphorylation | [[]] | Example | Example | Example |
OXPHOS-state | [[]] | Example | Example | Example |
OXPHOS-capacity | [[]] | Example | Example | Example |
oxygen concentration | [[]] | Example | Example | Example |
oxygen flux, in reaction r | [[]] | Example | Example | Example |
pathway control state | [[]] | Example | Example | Example |
permeability transition | [[]] | Example | Example | Example |
permeabilized cells | [[]] | Example | Example | Example |
permeabilized muscle fibers | [[]] | Example | Example | Example |
permeabilized tissue | [[]] | Example | Example | Example |
phosphorylation of ADP to ATP | [[]] | Example | Example | Example |
PΒ»/O2 ratio | [[]] | Example | Example | Example |
positive | [[]] | Example | Example | Example |
proton in the negative compartment | [[]] | Example | Example | Example |
proton in the positive compartment | [[]] | Example | Example | Example |
protonmotive force | [[]] | Example | Example | Example |
rate in ET-state | [[]] | Example | Example | Example |
rate in LEAK-state | [[]] | Example | Example | Example |
rate in OXPHOS-state | [[]] | Example | Example | Example |
rate in ROX state | [[]] | Example | Example | Example |
residual oxygen consumption | [[]] | Example | Example | Example |
respiration | [[]] | Example | Example | Example |
respiratory supercomplex | [[]] | Example | Example | Example |
sample | [[]] | Example | Example | Example |
substrate concentration at half-maximal rate | [[]] | Example | Example | Example |
substrate-uncoupler-inhibitor-titration | [[]] | Example | Example | Example |
tissue homogenate | [[]] | Example | Example | Example |
viable cells | [[]] | Example | Example | Example |
volume of chamber | [[]] | Example | Example | Example |
volume format | [[]] | Example | Example | Example |
volume of sample s | volume | Vs | [L] | Fig. 5; Tab. 5 |