Difference between revisions of "O2k-Publications: O2k-Fluorometry - Fluorophores"
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{{#ask:[[Category:Publications]] [[Instrument and method::Oxygraph-2k]] [[Instrument and method::O2k-Fluorometer]] [[Additional label::Amplex Red]] OR [[Additional label::Amplex UltraRed | {{#ask:[[Category:Publications]] [[Instrument and method::Oxygraph-2k]] [[Instrument and method::O2k-Fluorometer]] [[Additional label::Amplex Red]] OR [[Additional label::Amplex UltraRed]] OR [[Additional label::Safranin]] OR [[Additional label::Magnesium Green]] OR [[Additional label::Calcium Green 5N]] | ||
|?Was published in year | |?Was published in year | ||
|?Has title=Reference | |?Has title=Reference |
Revision as of 10:50, 11 December 2017
O2k-Publications: O2k-Fluorometry - Fluorophores
Sort in ascending/descending order by a click on one of the small symbols in squares below. Default sorting: chronological. Empty fields appear first in ascending order.
Was published in year | Reference | Preparation | Additional label | |
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Pallag 2022 Int J Mol Sci | 2022 | Pallag G, Nazarian S, Ravasz D, Bui D, Komlódi T, Doerrier C, Gnaiger E, Seyfried TN, Chinopoulos C (2022) Proline oxidation supports mitochondrial ATP production when Complex I is inhibited. https://doi.org/10.3390/ijms23095111 | Isolated mitochondria | Safranin NADH Q Proline |
MiPNet24.08 Safranin Analysis Template | 2020-05-13 | Excel template for safranin data analysis. | O2k-Core DatLab Safranin O2k-Analysis DL7.4 | |
MiPNet25.14 TPP Analysis Template | 2020-##-## | Excel template for TPP data analysis. | O2k-Core DatLab Safranin O2k-Analysis | |
Hassan 2020 MitoFit Preprint Arch | 2020 | Hassan Hazirah, Gnaiger Erich, Zakaria Fazaine, Makpol Suzana, Abdul Karim Norwahidah (2020) Alterations in mitochondrial respiratory capacity and membrane potential: a link between mitochondrial dysregulation and autism. https://doi.org/10.26124/mitofit:200003 | Permeabilized cells | Safranin |
Spinazzi 2019 Proc Natl Acad Sci U S A | 2019 | Spinazzi M, Radaelli E, Horré K, Arranz AM, Gounko NV, Agostinis P, Maia TM, Impens F, Morais VA, Lopez-Lluch G, Serneels L, Navas P, De Strooper B (2019) PARL deficiency in mouse causes Complex III defects, coenzyme Q depletion, and Leigh-like syndrome. Proc Natl Acad Sci U S A 116:277-86. 10.1073/pnas.1811938116 | Intact cells Permeabilized cells Isolated mitochondria | 2019-02 Safranin AmR CaG O2k-brief |
Rojas-Morales 2019 Free Radic Biol Med | 2019 | Rojas-Morales P, León-Contreras JC, Aparicio-Trejo OE, Reyes- Ocampo JG, Medina-Campos ON, Jiménez-Osorio AS, González-Reyes S, Marquina- Castillo B, Hernández-Pando R, Barrera-Oviedo D, Sánchez-Lozada LG, Pedraza-Chaverri J, Tapia E (2019) Fasting reduces oxidative stress, mitochondrial dysfunction and fibrosis induced by renal ischemia-reperfusion injury. Free Radic Biol Med 135:60-67. | Isolated mitochondria | 2019-02 Safranin |
Devaux 2019 Front Physiol | 2019 | Devaux JBL, Hedges CP, Birch N, Herbert N, Renshaw GMC, Hickey AJR (2019) Acidosis maintains the function of brain mitochondria in hypoxia-tolerant triplefin fish: a strategy to survive acute hypoxic exposure? Front Physiol 9:1941. | Permeabilized tissue Isolated mitochondria | 2019-02 Safranin MgG MitoFit 2021 MgG |
Salin 2018 Funct Ecol | 2018 | Salin K, Villasevil EM, Anderson GJ, Auer SK, Selman C, Hartley RC, Mullen W, Chinopoulos C, Metcalfe NB (2018) Decreased mitochondrial metabolic requirements in fasting animals carry an oxidative cost. Funct Ecol DOI: 10.1111/1365-2435.13125. | Homogenate | 2018-07 Safranin |
Aparicio-Trejo 2018 Free Radic Biol Med | 2018 | Aparicio-Trejo OE, Reyes-Fermín LM, Briones-Herrera A, Tapia E, León-Contreras JC, Hernández-Pando R, Sánchez-Lozada LG, Pedraza-Chaverri J (2018) Protective effects of N-acetyl-cysteine in mitochondria bioenergetics, oxidative stress, dynamics and S-glutathionylation alterations in acute kidney damage induced by folic acid. Free Radic Biol Med 130:379-96. | Intact cells Isolated mitochondria | 2018-11 Safranin AmR |
Dogan 2018 Cell Metab | 2018 | Dogan SA, Cerutti R, Benincá C, Brea-Calvo G, Jacobs HT, Zeviani M, Szibor M, Viscomi C (2018) Perturbed redox signaling exacerbates a mitochondrial myopathy. Cell Metab 28:764-77. | Isolated mitochondria | 2018-09 Safranin AmR |
Shirey 2016 Biochemistry | 2016 | Shirey K, Stover KR, Cleary J, Hoang N, Hosler J (2016) Membrane-anchored cyclic peptides as effectors of mitochondrial oxidative phosphorylation. Biochemistry 55:2100-11. | Isolated mitochondria SMP | Safranin |
Nemeth 2016 FASEB J | 2016 | Németh B, Doczi J, Csete D, Kacso G, Ravasz D, Adams D, Kiss G, Nagy AM, Horvath G, Tretter L, Mócsai A, Csépányi-Kömi R, Iordanov I, Adam-Vizi V, Chinopoulos C (2016) Abolition of mitochondrial substrate-level phosphorylation by itaconic acid produced by LPS-induced Irg1 expression in cells of murine macrophage lineage. FASEB J 30:286-300. | Isolated mitochondria | Safranin |
Chowdhury 2015 Biosci Rep | 2016 | Chowdhury SK, Djordjevic J, Albensi B, Fernyhough P (2015) Simultaneous evaluation of substrate-dependent oxygen consumption rates and mitochondrial membrane potential by TMRM and safranin in cortical mitochondria. Biosci Rep 36:e00286. | Homogenate Isolated mitochondria | Safranin TMRM BEC 2020.1 |
Krumschnabel 2014 Methods Enzymol | 2014 | Krumschnabel G, Eigentler A, Fasching M, Gnaiger E (2014) Use of safranin for the assessment of mitochondrial membrane potential by high-resolution respirometry and fluorometry. Methods Enzymol 542:163-81. https://doi.org/10.1016/B978-0-12-416618-9.00009-1 | Homogenate | Safranin O2k-Demo O2k-MultiSensor 1PGM;2D;3U- SUIT-006 SUIT-020 SUIT-020 Safr mt D036 SUIT-020 Fluo mt D033 SUIT-020 Fluo mt D036 SUIT-006 Fluo mt D034 SUIT-006 O2 mt D022 SUIT-006 O2 D051 SUIT-021 SUIT-021 Fluo mt D036 O2k-brief BEC 2020.2 MitoFit 2021 MgG MitoFit 2021 Tissue normoxia MitoFit 2022 CaG MitoFit 2022 pmF MitoFit 2022 NADH mt-Membrane |
Power 2014 Physiol Rep | 2014 | Power A, Pearson N, Pham T, Cheung C, Phillips A, Hickey A (2014) Uncoupling of oxidative phosphorylation and ATP synthase reversal within the hyperthermic heart. Physiol Rep pii:e12138. | Isolated mitochondria | Safranin MgG MitoFit 2021 MgG |
Chinopoulos 2014 Methods Enzymol | 2014 | Chinopoulos C, Kiss G, Kawamata H, Starkov AA (2014) Measurement of ADP-ATP exchange in relation to mitochondrial transmembrane potential and oxygen consumption. Methods Enzymol 542:333-48. doi:10.1016/B978-0-12-416618-9.00017-0 | Permeabilized cells | Safranin MgG O2k-brief ATP MitoFit 2021 MgG MitoFit 2022 NADH O2k-Demo |
Pham 2014 Am J Physiol | 2014 | Pham T, Loiselle D, Power A, Hickey AJ (2014) Mitochondrial inefficiencies and anoxic ATP hydrolysis capacities in diabetic rat heart. Am J Physiol 307:C499–507. | Homogenate | Safranin MgG AmR MitoFit 2021 MgG |
Elustondo 2014 Biochim Biophys Acta | 2014 | Elustondo PA, Negoda A, Kane CL, Kane DA, Pavlov EV (2014) Spermine selectively inhibits high-conductance, but not low-conductance calcium-induced permeability transition pore. Biochim Biophys Acta 1847:231–40. | Isolated mitochondria | Calcium Green 5N CaG O2k-Demo calcium |
Kiss 2014 FASEB J | 2014 | Kiss G, Konrad C, Pour-Ghaz I, Mansour JJ, Németh B, Starkov AA, Adam-Vizi V, Chinopoulos C (2014) Diaphorases provide NAD+ in anoxia. FASEB J 28:1682-97. | Isolated mitochondria | Safranin MitoFit2022rTCA |
Tretter 2012 Free Radic Biol Med | 2012 | Tretter Laszlo, Adam-Vizi Vera (2012) High Ca2+ load promotes hydrogen peroxide generation via activation of α-glycerophosphate dehydrogenase in brain mitochondria. Free Radic Biol Med 53:2119-30. | Isolated mitochondria | Fura-6F AmR Safranin |
Chinopoulos 2009 | 2009 | Chinopoulos C, Vajda S, Csanady L, Mandi M, Mathe K, Adam-Vizi V (2009) A Novel Kinetic Assay of Mitochondrial ATP-ADP Exchange Rate Mediated by the ANT. Biophys J 96, 2490-504. doi:10.1016/j.bpj.2008.12.3915 | Isolated mitochondria | MgG Safranin ANT MitoFit 2021 MgG |
O2k-Manual and protocols
- See also »MitoPedia: Fluorometry