Talk:MitoPedia: DatLab: Difference between revisions

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== General guideline for editors and users ==


=== Abbreviation for shortcuts ===
<big><big>'''List of DatLab menus'''</big></big>


In Mitopedia DatLab the abbreviation field is used for shortcuts. Shortcut keys help provide an easier and quicker method of navigating in DatLab.
__TOC__


=== Manual as a reference ===
== DatLab 8 ==


Further information of each DatLab Mitopedia term can be found in the according manuals, which are listed as a reference.


=== DatLab error messages ===
=== General information ===
::::» [[Getting started - DatLab | Getting Started]]
::::» [[Graph control - DatLab | Graph Control]]
::::» [[Graphical user interface - DatLab | Graphical user interface]]
::::» [[User - DatLab |User]]
::::» [[Keyboard shortcuts - DatLab | Keyboard shortcuts]]


In Mitopedia DatLab a list of common [[DatLab error messages]] and the according action/solution are provided. Additionally a link from the corresponding term is added for a quicker access to the appropriate DatLab error message.
=== Navigation ===
::::» [[Start screen - DatLab | Start screen]]
::::» [[Show graphs - DatLab | Show graphs]]


=== O2k ===
::::» [[Connect to O2k | Connect]]
::::» [[Disconnect - DatLab | Disconnect]]
::::» [[Start measurement - DatLab | Start measurement]]
::::» [[Illumination on/off]]
::::» [[Stirrer A on/off]]
::::» [[Stirrer B on/off]]
::::» [[Stirrers A+B on/off | Stirrers A+B on/off]]
::::» [[Stirrer test]]
::::» [[Channel and data vector labels - DatLab | Channel and data vector labels]]
:::::* A: O2
:::::* A: Amp
:::::* A: pX
:::::* B: O2
:::::* B: Amp
:::::* B: pX


== Contextual help - DatLab windows with hyperlinks ==
=== TIP2k ===
::::» [[MiPNet12.10 TIP2k-manual | TIP2k control]]


=== Protocols ===
::::» [[Lower O2 limit - DatLab | Set lower O2 limit]]
::::» [[Instrumental: Browse DL-Protocols and templates | Instrumental: Browse DL protocols]]
::::» [[SUIT: Browse DL-Protocols and templates | SUIT: Browse DL protocols]]
::::» [[MitoPedia: SUIT | Open MitoPedia: SUIT]]
::::» [[Protocol editor - DatLab | Protocol editor]]
:::::* Protocol editor
:::::::* Description
:::::::* Application and channels
:::::::* Events and marks
:::::::* Metadata and default values


: File
=== Experiment ===
::::» [[Sample - DatLab | Sample and medium]]
::::» [[Experimental log - DatLab | Experimental log]]
::::» [[Events - DatLab | Add events]]


::- File search: [[File search in DatLab |File search]]
=== Calibration ===
::- Export - Data to text file: [[Text file in DatLab |Text file]]
::::» Open
::- Export - Events to text file: [[Text file in DatLab |Text file]]
:::::*  [[ Oxygen calibration - DatLab | A: O2 calibration]]
::- Export - One channel to DatLab 2 analysis: [[DatLab 2]]
:::::*  [[ Oxygen calibration - DatLab | B: O2 calibration]]
::- Change user: [[User code in DatLab |User]]
:::::*  [[ Q calibration - DatLab | A: Q calibration]]
:::::*  [[ Q calibration - DatLab | B: Q calibration]]
:::::*  [[ NADH calibration | A: NADH calibration]]
:::::*  [[ NADH calibration | B: NADH calibration]]


: Oxygraph-2k
=== Flux / Slope ===
::- O2k control: [[O2k control]]
::::» Open
::- O2k configuration: [[O2k configuration]]
:::::*  [[ Flux / Slope | A: O2 flux/slope]]
::- Stirrer test: [F9]: [[Stirrer test]]
:::::*  [[ Flux / Slope | B: O2 flux/slope]]
::- Manage setups: [[Manage setups and templates in DatLab |Manage setups and templates]]
:::::* [[ Flux / Slope | A: Fluo flux/slope]]
:::::*  [[ Flux / Slope | B: Fluo flux/slope]]
:::::*  [[ Flux / Slope | A: Amp flux/slope]]
:::::*  [[ Flux / Slope | B: Amp flux/slope]]
:::::*  [[ Flux / Slope | A: pX flux/slope]]
:::::*  [[ Flux / Slope | B: pX flux/slope]]


: TIP2k
=== Graph ===
::- TIP2k control: [[Titration-Injection microPump]]
::::» Options
::- Manage setups: [[Manage setups and templates in DatLab |Manage setups and templates]]
:::::*  [[Graph options - DatLab | Graph 1]]
:::::*  [[Graph options - DatLab | Graph 2]]
:::::*  [[Graph options - DatLab | Graph 3]]


:Experiment
=== Layout ===
::- Edit: [[Edit experiment in DatLab |Edit experiment]]
::::» [[ Layout for DatLab graphs | Standard layouts]]
::- Exp. log: [[Experimental log in DatLab |Experimental log]]
:::::* O2 only
::- Add event: [[Event in DatLab |Event]]
:::::::* 01 Calibration show temperature
:::::::* 02 Calibration - Background
:::::::* 03 Background high O2
:::::::* 04a Flux per volume
:::::::* 04b Flux per volume overlay
:::::::* 05a Specific flux
:::::::* 05b Specific flux overlay
:::::::* 06a Specific flux high O2
:::::::* 06b Specific flux high O2 overlay
:::::::* 07a Flux Control Ratios
:::::::* 07b Flux Control Ratios overlay
:::::::* O2 raw signal
:::::* Fluorometric
:::::::* 01a Fluo raw signal with slope
:::::::* 01b Fluo raw signal without slope
:::::::* 02 Fluo calibrated with slope
:::::::* 02 Fluo calibrated without slope
:::::* Amperometric
:::::::* 01 Amp Amperometric raw signal
:::::::* 02 Amp Amperometric calibrated
:::::* Potentiometric
:::::::* 01 pX Potentiometric raw signal
:::::::* 02 pX Potentiometric calibrated
:::::::* 03 pH raw signal
:::::::* 04 pH calibrated
:::::::* 05 TPP+ raw signal
:::::::* 06 TPP+ calibrated
:::::* Q
:::::::* 01 Q raw signal
:::::::* 02 Reduced Q fraction
:::::* NADH
:::::::* 01 Calibration - NADH raw signal
:::::::* 02 NADH raw signal
:::::::* 03 Reduced NADH fraction
:::::* PhotoBiology
:::::::* 01 PhotoBiology


:Calibration
=== Marks ===
::- O2: [[MiPNet19.18D O2k-Calibration|O2k-Calibration]]
::::» [[ Mark statistics | Mark statistics]]  
::- Amp: [[MiPNet19.18D O2k-Calibration|O2k-Calibration]]
::::» Set outlier index threshold
::- pX: [[MiPNet19.18D O2k-Calibration|O2k-Calibration]]
:::::* System default
:Flux / Slope
:::::* Lab default
::- O2: [[Flux / Slope]]
:::::* Session value
::- Amp: [[Flux / Slope]]
::- pX: [[Flux / Slope]]


:Graph
=== Coenzyme Q ===
::- Select plots: [[Plot]] / [[Layout for DatLab graphs]]
::::» Start Cyclic Voltammetry
::- Scaling: [[Scaling]] / [[Layout for DatLab graphs]]
::- Info: [[Layout for DatLab graphs]]
::- Options: [[Graph options in DatLab |Graph options]]


:Layout
=== PhotoBiology ===
::- Info / Load / Save: [[Layout for DatLab graphs]]
::::» Set light intensity
:::::* PhotoBiology: Set light intensity for both chambers
:::::* PhotoBiology: Set light intensity program for both chambers


:Marks
=== Test ===
::- Statistics: [[Mark statistics]]
::::» Insert test data
::- Manage mark stat. templates: [[Manage setups and templates in DatLab |Manage setups and templates]]
::::» Test Wizard
::- Names: [[Mark names in DatLab |Mark names]]
::::» Test Start Measurement
::- Manage mark name templates: [[Manage setups and templates in DatLab |Manage setups and templates]]
::::» Test Channel Parameters
::::» Test Plot Options
::::» Calibration
::::» Show info dialog
::::» Show warning dialog
::::» Show error dialog with details
::::» Show error dialog without details
::::» Show confirmation dialog


:Other
=== Help ===
::- Edit mark information: [[Marks]]
::::» [[ MitoPedia | Open MitoPedia]]
::::» [[ MitoPedia: DatLab | Open MitoPedia: DatLab]]
::::» USB console
::::» About DatLab
:::::* DatLab version 8
:::::::* Special Attributions
 
 
[[Image:BB-Bioblast.jpg|left|40px|link=http://www.bioblast.at/index.php/Bioblast:About|Bioblast wiki]]
== Popular Bioblast page ==
::: [[MitoPedia: DatLab]] has been accessed more than
::::*  10,000 times (2019-12-12)
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Latest revision as of 13:13, 10 April 2024

List of DatLab menus

DatLab 8

General information

» Getting Started
» Graph Control
» Graphical user interface
» User
» Keyboard shortcuts

Navigation

» Start screen
» Show graphs

O2k

» Connect
» Disconnect
» Start measurement
» Illumination on/off
» Stirrer A on/off
» Stirrer B on/off
» Stirrers A+B on/off
» Stirrer test
» Channel and data vector labels
  • A: O2
  • A: Amp
  • A: pX
  • B: O2
  • B: Amp
  • B: pX

TIP2k

» TIP2k control

Protocols

» Set lower O2 limit
» Instrumental: Browse DL protocols
» SUIT: Browse DL protocols
» Open MitoPedia: SUIT
» Protocol editor
  • Protocol editor
  • Description
  • Application and channels
  • Events and marks
  • Metadata and default values

Experiment

» Sample and medium
» Experimental log
» Add events

Calibration

» Open

Flux / Slope

» Open

Graph

» Options

Layout

» Standard layouts
  • O2 only
  • 01 Calibration show temperature
  • 02 Calibration - Background
  • 03 Background high O2
  • 04a Flux per volume
  • 04b Flux per volume overlay
  • 05a Specific flux
  • 05b Specific flux overlay
  • 06a Specific flux high O2
  • 06b Specific flux high O2 overlay
  • 07a Flux Control Ratios
  • 07b Flux Control Ratios overlay
  • O2 raw signal
  • Fluorometric
  • 01a Fluo raw signal with slope
  • 01b Fluo raw signal without slope
  • 02 Fluo calibrated with slope
  • 02 Fluo calibrated without slope
  • Amperometric
  • 01 Amp Amperometric raw signal
  • 02 Amp Amperometric calibrated
  • Potentiometric
  • 01 pX Potentiometric raw signal
  • 02 pX Potentiometric calibrated
  • 03 pH raw signal
  • 04 pH calibrated
  • 05 TPP+ raw signal
  • 06 TPP+ calibrated
  • Q
  • 01 Q raw signal
  • 02 Reduced Q fraction
  • NADH
  • 01 Calibration - NADH raw signal
  • 02 NADH raw signal
  • 03 Reduced NADH fraction
  • PhotoBiology
  • 01 PhotoBiology

Marks

» Mark statistics
» Set outlier index threshold
  • System default
  • Lab default
  • Session value

Coenzyme Q

» Start Cyclic Voltammetry

PhotoBiology

» Set light intensity
  • PhotoBiology: Set light intensity for both chambers
  • PhotoBiology: Set light intensity program for both chambers

Test

» Insert test data
» Test Wizard
» Test Start Measurement
» Test Channel Parameters
» Test Plot Options
» Calibration
» Show info dialog
» Show warning dialog
» Show error dialog with details
» Show error dialog without details
» Show confirmation dialog

Help

» Open MitoPedia
» Open MitoPedia: DatLab
» USB console
» About DatLab
  • DatLab version 8
  • Special Attributions


Bioblast wiki

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MitoPedia: DatLab has been accessed more than
  • 10,000 times (2019-12-12)
  • 5,000 times (2018-10-19)
Retrieved from "https://wiki.oroboros.at/index.php?title=Talk:MitoPedia:_DatLab&oldid=247020"
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